BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027H11LP1|AL428812
(890 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1424 1764 0.0
>3x_Contig1424
Length = 9842
Score = 1764 bits (890), Expect = 0.0
Identities = 890/890 (100%)
Strand = Plus / Plus
Query: 1 gatcaatttctaaatattctctcattgcttgatacaaagagtgcaaacttggttcaaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6032 gatcaatttctaaatattctctcattgcttgatacaaagagtgcaaacttggttcaaagg 6091
Query: 61 accagaaaaactctggggtgtcaagtacactggatgataggttaacatcgacgcgtaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6092 accagaaaaactctggggtgtcaagtacactggatgataggttaacatcgacgcgtaact 6151
Query: 121 tgaatagcttacctgatttcttcaataattgttcccttttcaaccccaaggtaccataca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6152 tgaatagcttacctgatttcttcaataattgttcccttttcaaccccaaggtaccataca 6211
Query: 181 aagcaagtcttttaggcaatttagagactgacccgaagatcggaactatgcgcgcttcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6212 aagcaagtcttttaggcaatttagagactgacccgaagatcggaactatgcgcgcttcaa 6271
Query: 241 atctcgatagtttgaccgattgagctatggcatgggacaatgttaaggctgttaagtggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6272 atctcgatagtttgaccgattgagctatggcatgggacaatgttaaggctgttaagtggt 6331
Query: 301 ctccggacctcaaagtcactatgtcattaaaaatacgaggtctttccgtatccatgtcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6332 ctccggacctcaaagtcactatgtcattaaaaatacgaggtctttccgtatccatgtcat 6391
Query: 361 attcgaaatggaagctttcaatctcgatatcttgttcatctaaaggtttcagcaccatgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6392 attcgaaatggaagctttcaatctcgatatcttgttcatctaaaggtttcagcaccatgt 6451
Query: 421 tcttataagatgaaaacgagatgtcacctaggatgtttttttcttgaatttcagtgaaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6452 tcttataagatgaaaacgagatgtcacctaggatgtttttttcttgaatttcagtgaaat 6511
Query: 481 tccagaacacaactacaccataactgaatatgaagatttccgcatgttgctgttgaaata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6512 tccagaacacaactacaccataactgaatatgaagatttccgcatgttgctgttgaaata 6571
Query: 541 atgaagttttaccattaatctcattgaaagcctccagttccgcttctgcattattctcct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6572 atgaagttttaccattaatctcattgaaagcctccagttccgcttctgcattattctcct 6631
Query: 601 cagcaaaatattgtggctcacttgggtcgaaggacacagaagtattgactggcggattcg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6632 cagcaaaatattgtggctcacttgggtcgaaggacacagaagtattgactggcggattcg 6691
Query: 661 gtagatgatctggtgtattctcggcatttaaattatttgttactcccccttcgtctaact 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6692 gtagatgatctggtgtattctcggcatttaaattatttgttactcccccttcgtctaact 6751
Query: 721 cgtagttattgttaacatcttcaagcgtttcgactcccgaaaaatattcataatgatgat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6752 cgtagttattgttaacatcttcaagcgtttcgactcccgaaaaatattcataatgatgat 6811
Query: 781 ctcttctctcgctggtatctattaaatagtcaatgattgacttacctccttgggtctttt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6812 ctcttctctcgctggtatctattaaatagtcaatgattgacttacctccttgggtctttt 6871
Query: 841 ttgatatgtttgatttaattctgaaaccatccttgccaggcaataaggga 890
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6872 ttgatatgtttgatttaattctgaaaccatccttgccaggcaataaggga 6921
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7026
Number of Sequences: 1807
Number of extensions: 7026
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 890
length of database: 10,358,551
effective HSP length: 16
effective length of query: 874
effective length of database: 10,329,639
effective search space: 9028104486
effective search space used: 9028104486
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)